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Figure 6 | BMC Bioinformatics

Figure 6

From: Recognizing protein–protein interfaces with empirical potentials and reduced amino acid alphabets

Figure 6

Spectra of the distribution of the energy of association of different serie of decoys. Native and decoy energy distributions for three complexes: 1AR0 (top), 1BJF (middle) and 1FBT (bottom), using the energy functions with two (left), six (middle), and 20 amino acid classes (right). The native energy is shown as a thin bar. Thick curves in the lefthand panels correspond to a random energy model for decoy energies; see main text. Our decoy energies are significantly more diverse than the random energy model.

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