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Table 2 Liver gene expression datasets in miRAS

From: miRAS: a data processing system for miRNA expression profiling study

Dataset Type

Dataset Name

Tissue Description

Microarray:

  
 

Hep3B vs Universal_control*

Hepatoma cell line

 

SNU_387 vs Universal_control*

Hepatoma cell line

 

HepG2 vs Universal_control*

Hepatoma cell line

 

PLC_PRF_5 vs Universal_control*

Hepatoma cell line

 

SNU_182 vs Universal_control*

Hepatoma cell line

 

SNU_354 vs Universal_control*

Hepatoma cell line

 

SNU_368 vs Universal_control*

Hepatoma cell line

 

SNU_449 vs Universal_control*

Hepatoma cell line

 

SNU_475 vs Universal_control*

Hepatoma cell line

SAGE:

  
 

SAGE_Liver_cholangiocarcinoma_B_K1**

Liver

 

SAGE_Liver_cholangiocarcinoma_B_K2D**

Liver

 

SAGE_Liver_cholangiocarcinoma_CL_K3**

Liver cell line

 

SAGE_Liver_cholangiocarcinoma_CL_K4**

Liver cell line

 

SAGE_Liver_normal_B_1**

Normal bulk liver

  1. * Datasets from GEO [43], GEO accession GSM81024- GSM81059
  2. ** Datasets from SAGE Genie [44] of CGAP, names are for library.