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Table 5 Comparison of the algorithms on the 39 yeast sporulation genes

From: Measuring similarities between gene expression profiles through new data transformations

Algorithm

Number of genes in incorrect clusters

% of genes in incorrect clusters

Adjusted Rand Index

TransChisq

3

7.7

0.830

PCAChisq

14

35.9

0.527

PoissonC

7

18.0

0.675

PearsonC

13

33.3

0.483

Eucli

8

20.5

0.600

Eucli on rescaled data

17

43.6

0.483

SRC

NA

NA

0.325