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Table 4 Top 20 elements of the 441 ones of a window of size 21 according to the Fisher's index

From: Prediction of the burial status of transmembrane residues of helical membrane proteins

Rank Position1 Type Fisher's index
1 T conservation index 0.987
2 C4 conservation index 0.534
3 N4 conservation index 0.469
4 N3 conservation index 0.307
5 N7 conservation index 0.306
6 C3 conservation index 0.248
7 T L2 0.243
8 C7 conservation index 0.240
9 T G 0.203
10 T I 0.143
11 C8 conservation index 0.132
12 C1 conservation index 0.092
13 T V 0.059
14 N1 conservation index 0.057
15 N4 I 0.057
16 N4 G 0.056
17 T F 0.053
18 T S 0.052
19 N8 conservation index 0.045
20 N4 L 0.041
  1. 1T: the target residue, C4: the 4th residue C terminal to the target residue, N4: the 4th residue N terminal to the target residue. Thus, the conservation index of the target residue is most indicative of its burial status, and the conservation index of the 4th residue C terminal to the target residue is second most indicative of the burial status of the target residue.
  2. 2L: leucine, G: glycine, I: isoleucine, V: valine, F: phenylalanine and S: serine.