Skip to main content

Advertisement

Table 3 Average recall and precision with various E-values

From: Protein structural similarity search by Ramachandran codes

  Family level   Superfamily level
E-value Avg. recall (%) Avg. precision (%) Avg. fallout (10-4) Avg. recall (%) Avg. precision (%) Avg. fallout (10-4)
1.0E-40 30.37 99.83 0.01 20.75 100.00 0.00
1.0E-35 34.19 99.79 0.03 23.34 100.00 0.00
1.0E-30 38.75 99.69 0.09 26.49 100.00 0.00
1.0E-25 44.21 99.00 0.31 31.18 100.00 0.00
1.0E-20 49.85 98.28 0.60 35.80 99.94 0.05
1.0E-15 58.40 97.52 1.11 41.75 99.64 0.24
1.0E-13 61.40 97.10 1.95 44.14 99.33 0.78
1.0E-10 67.98 92.71 4.00 49.99 96.34 2.59
1.0E-07 74.13 83.61 14.71 56.26 83.80 15.88
1.0E-05 78.49 71.00 46.80 61.83 68.26 57.58
1.0E-03 83.04 60.37 141.24 68.83 49.16 193.98
1.0E-01 89.22 48.39 429.86 77.66 32.66 648.34
1 91.60 46.19 687.41 82.03 27.92 1127.10
10 94.12 43.60 1101.13 86.94 25.91 1911.62
100 95.98 40.92 1680.02 91.36 24.85 3004.44
1000 97.63 38.50 2335.32 95.20 23.83 4468.79