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Table 16 Five NE categories in GENIA ontology

From: BIOSMILE: A semantic role labeling system for biomedical verbs using a maximum-entropy model with automatically generated template features

NE

Definition

Abbreviation

Protein

Proteins include protein groups, families, molecules, complexes, and substructures.

PTN

Nucleotide

A nucleic acid molecule or the compounds that consist of nucleic acids.

NUC

Other organic compounds

Organic compounds excluding proteins and nucleotides.

OOC

Source

Sources are biological locations where substances are found and their reactions take place.

SRC

Others

The terms that are not categorized as sources or substances can be marked.

OTR