Skip to main content

Table 16 Five NE categories in GENIA ontology

From: BIOSMILE: A semantic role labeling system for biomedical verbs using a maximum-entropy model with automatically generated template features

NE Definition Abbreviation
Protein Proteins include protein groups, families, molecules, complexes, and substructures. PTN
Nucleotide A nucleic acid molecule or the compounds that consist of nucleic acids. NUC
Other organic compounds Organic compounds excluding proteins and nucleotides. OOC
Source Sources are biological locations where substances are found and their reactions take place. SRC
Others The terms that are not categorized as sources or substances can be marked. OTR