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Figure 6 | BMC Bioinformatics

Figure 6

From: Considerations in the identification of functional RNA structural elements in genomic alignments

Figure 6

Relationship between scores of real and shuffled genomic windows. Each scatter plot shows scores for 28,275 real tiling windows from Chromosome 19 in which more than 50% of all nucleotides were replaced in dinucleotide shuffling by shuffle-pair.pl (the same 28,275 as in the middle column of Figure 4b). In all cases the horizontal axis is real sequence, vertical axis is shuffled. left, shuffling using shuffle-pair.pl; right, using shuffle-aln.pl.

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