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Figure 13 | BMC Bioinformatics

Figure 13

From: A replica exchange Monte Carlo algorithm for protein folding in the HP model

Figure 13

Outline Replica exchange Monte Carlo search. U MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaqabeGadaaakeaat0uy0HwzTfgDPnwy1egaryqtHrhAL1wy0L2yHvdaiqaacqWFueFvaaa@3848@ (a, b) denotes a uniform random selection of a real number in the inclusive range a to b. The procedure swapLabels(c a , c b ) swaps the labels (and therefore their temperature values) of replicas a and b.

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