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Figure 9 | BMC Bioinformatics

Figure 9

From: A replica exchange Monte Carlo algorithm for protein folding in the HP model

Figure 9

Effect of maximum temperature on run-time. Results for mean runtimes of 100 independent runs is shown for an increasing value of the maximum temperature. In the 2D case of folding S1-7 (left side), extremely low and extremely high temperatures yield the worst running times. The mean run-time seems to consistently scale worse as the maximum temperature is increased in the 3D case, while folding S2-7.

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