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Table 1 Global measures of the Spearman's rank correlation coefficients (ρ)

From: Benchmarking consensus model quality assessment for protein fold recognition

  TM-score MaxSub GDT Combined
3D-Jury 0.955 0.924 0.925 0.943
LEE* 0.943 0.903 0.909 0.926
ModFOLD 0.843 0.807 0.807 0.825
PROQ* 0.828 0.764 0.759 0.789
Pcons* 0.803 0.773 0.765 0.786
ProQ-MX 0.779 0.755 0.751 0.768
ModSSEA 0.744 0.736 0.742 0.747
MODCHECK 0.729 0.659 0.658 0.686
ProQ-LG 0.688 0.651 0.640 0.665
  1. All models are pooled together and the ρ is measured between predicted and observed model quality scores. The combined observed model quality score was also calculated for each individual model e.g. mean score for each model (TM-score+MaxSub+GTD)/3.*The MQAP scores for these methods were downloaded from CASP7 website; all other MQAP methods were run in house during the CASP7 experiment. †MQAP methods which rely on the comparison of multiple models or include additional information from multiple servers; all other methods are capable of producing a single score based on a single model.
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