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Table 10 FDR Analysis of Parkinson's Dataset using Affymetrix MAS05

From: A unified framework for finding differentially expressed genes from microarray experiments

AlphaValue

t-statistics

SAM

Adaptive

Combined Adaptive

Two-Way

Unified

 

GS

%FP

GS

%FP

GS

%FP

GS

%FP

GS

%FP

GS

%FP

0.01

46

50.87

46

50.87

48

48.75

48

48.75

49

47.76

51

45.88

0.005

25

46.8

27

43.34

25

46.8

28

41.8

28

41.8

31

37.75

0.001

12

19.5

13

18

11

21.27

12

19.5

14

16.71

14

16.71

  1. GS, Genes Selected; FP, Percentage of False Positives.