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Table 2 The oligonulceotide design of large gene families from different programs

From: Selection of long oligonucleotides for gene expression microarrays using weighted rank-sum strategy

Programs* Var family (Total No. 76) Rifin family (Total No. 164) Stevor family (Total No. 34)
  #designeda #acceptedb #designed #accepted #designed #accepted
OligoRankPick 76 63 164 140 34 31
ArrayOligoSelector 76 31 162 58 34 13
OligoPicker 37 37 78 74 12 12
OligoAarray 2.1 22 9 162 118 34 22
  1. *ArrayOligoSelector 3.8.4; OligoPicker; OligoArray 2.1. a: oligonucleotide number selected by the program; b: accepted oligonucleotide number based on BLAST score of non-target (< 40% continuous identity).