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Table 2 All most specific frequent patterns for family A

From: SEARCHPATTOOL: a new method for mining the most specific frequent patterns for binding sites with application to prokaryotic DNA sequences

Pattern Matches(No seq,1st position) support Total
AA [1,7] [7,5] 2 2
AG [1,1] [2,3] [2,5] [4,4] [6,4] [7,1] 4 6
AT [3,6] [4,2] [5,5] [6,2] 2 4
A.A [2,3] [3,6] [4,2] [6,2] 3 4
ATA [3,6] [4,2] [6,2] 2 3
AGC [1,1] [2,5] [7,1] 2 3
A..G [2,3] [4,2] [4,4] [6,2] [7,1] 4 5
AG.G [2,3] [4,4] [7,1] 3 3
ATAG [4,2] [6,2] 2 2
A.AG [2,3] [4,2] [6,2] 3 3
AG..C [1,1] [2,3] [4,4] 2 3
AG.GC [2,3] [4,4] 2 2
A....A [3,3] [7,1] 2 2
  1. Bold patterns are the results of step 2.
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