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Table 3 Presentation of experiment datasets

From: SEARCHPATTOOL: a new method for mining the most specific frequent patterns for binding sites with application to prokaryotic DNA sequences

TF

Pattern Length

No genes (sequences)

No known Sites

No checked sites

Min-Len Sequence

Max-Len Sequence

Avr-Len Sequence

SigL

17

6

6

6

124

240

197.6

comA

15

4

5

4

144

400

276.5

Hrca

27

2

2

2

119

238

178.5

zur

14

3

3

3

106

359

234.3

mntr

19

2

4

2

280

330

305

gltr

15

2

4

4

197

384

290.5

glnr

17

3

6

3

110

400

229.66

Spo0A

7

10

23

21

84

451

284.3

RocR

15

2

7

4

277

291

284

Fnr

16

5

6

6

186

246

211.6

CodY

11

4

4

4

179

451

356

Fur

20

20

23

21

82

451

231.65

DegU

20

14

15

11

133

451

335.85

TnrA

17

21

25

20

161

451

287.47