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Table 3 Presentation of experiment datasets

From: SEARCHPATTOOL: a new method for mining the most specific frequent patterns for binding sites with application to prokaryotic DNA sequences

TF Pattern Length No genes (sequences) No known Sites No checked sites Min-Len Sequence Max-Len Sequence Avr-Len Sequence
SigL 17 6 6 6 124 240 197.6
comA 15 4 5 4 144 400 276.5
Hrca 27 2 2 2 119 238 178.5
zur 14 3 3 3 106 359 234.3
mntr 19 2 4 2 280 330 305
gltr 15 2 4 4 197 384 290.5
glnr 17 3 6 3 110 400 229.66
Spo0A 7 10 23 21 84 451 284.3
RocR 15 2 7 4 277 291 284
Fnr 16 5 6 6 186 246 211.6
CodY 11 4 4 4 179 451 356
Fur 20 20 23 21 82 451 231.65
DegU 20 14 15 11 133 451 335.85
TnrA 17 21 25 20 161 451 287.47
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