Meme | Consensus | Motif sampler | Mitra | Searchpattool | |
---|---|---|---|---|---|
Run times | 2 | 2 | 20 | 5 | 1 |
Number of site per sequence | zoops anr | 0-n 1-n | Max n sites | no | no |
Minimum number of occurrences | no | no | no | 2–3 | no |
Minimum support | no | no | no | no | 60% |
Number of mismatches | no | no | no | 0–4 | no |
Pattern length input | L* | L | L | L | Max L |
Number of outputs | 40 | 40 | 10 (x 20) Limited to 40 | Best 40 patterns | Limited to 40 best zs-sup Ordered by p-value + and support - |
Pattern length output | L | L | L | L | 2 to L Limited to L |