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Table 2 The block transition

From: An evolutionary method for learning HMM structure: prediction of protein secondary structure

block transition

percentage used on each state

number of times used in the generated sequence

state0 (H) → state17 (H)

36%

2468

state0 (H) → state39 (H)

42%

2867

state3 (H) → state1 (H)

56%

3477

state6 (E) → state33 (E)

24%

2461

state9 (E) → state27 (E)

30%

2377

state9 (E) → state43 (E)

33%

2635

state11 (x) → state15 (x)

30%

4143

state11 (x) → state31 (x)

15%

2093

state11 (x) → state50 (x)

16%

2165

state14 (H) → state51 (x)

60%

2733

state16 (x) → state4 (E)

24%

3310

state16 (x) → state31 (x)

19%

2662

state16 (x) → state50 (x)

35%

4809

state18 (H) → state50 (x)

33%

2359

state19 (E) → state7 (E)

42%

2086

state21 (E) → state7 (E)

55%

2702

state23 (H) → state12 (H)

31%

3347

state23 (H) → state48 (H)

41%

4436

state23 (H) → state51 (x)

21%

2272

state26 (H) → state51 (x)

57%

3394

state27 (E) → state15 (x)

26%

3005

state27 (E) → state28 (x)

34%

3914

state29 (x) → state28 (x)

22%

2193

state29 (x) → state36 (x)

31%

3017

state30 (H) → state48 (H)

75%

4577

state31 (x) → state0 (H)

21%

4564

state31 (x) → state10 (x)

12%

2588

state31 (x) → state31 (x)

16%

3555

state31 (x) → state32 (H)

21%

4551

state31 (x) → state39 (H)

11%

2408

state31 (x) → state50 (x)

13%

2822

state32 (H) → state17 (H)

45%

4062

state38 (x) → state4 (E)

42%

3304

state40 (H) → state41 (H)

66%

5482

state42 (H) → state48 (H)

87%

6105

state44 (E) → state27 (E)

30%

2996

state49 (H) → state22 (H)

39%

6674

state49 (H) → state24 (H)

26%

4508

state49 (H) → state30 (H)

18%

3162

state50 (x) → state10 (x)

13%

2807

state50 (x) → state31 (x)

34%

7362

state50 (x) → state50 (x)

17%

3772

state51 (x) → state15 (x)

14%

2056

state51 (x) → state31 (x)

25%

3597

state51 (x) → state50 (x)

20%

2986

state51 (x) → state51 (x)

20%

2892