From: An evolutionary method for learning HMM structure: prediction of protein secondary structure
block transition | percentage used on each state | number of times used in the generated sequence |
---|---|---|
state0 (H) → state17 (H) | 36% | 2468 |
state0 (H) → state39 (H) | 42% | 2867 |
state3 (H) → state1 (H) | 56% | 3477 |
state6 (E) → state33 (E) | 24% | 2461 |
state9 (E) → state27 (E) | 30% | 2377 |
state9 (E) → state43 (E) | 33% | 2635 |
state11 (x) → state15 (x) | 30% | 4143 |
state11 (x) → state31 (x) | 15% | 2093 |
state11 (x) → state50 (x) | 16% | 2165 |
state14 (H) → state51 (x) | 60% | 2733 |
state16 (x) → state4 (E) | 24% | 3310 |
state16 (x) → state31 (x) | 19% | 2662 |
state16 (x) → state50 (x) | 35% | 4809 |
state18 (H) → state50 (x) | 33% | 2359 |
state19 (E) → state7 (E) | 42% | 2086 |
state21 (E) → state7 (E) | 55% | 2702 |
state23 (H) → state12 (H) | 31% | 3347 |
state23 (H) → state48 (H) | 41% | 4436 |
state23 (H) → state51 (x) | 21% | 2272 |
state26 (H) → state51 (x) | 57% | 3394 |
state27 (E) → state15 (x) | 26% | 3005 |
state27 (E) → state28 (x) | 34% | 3914 |
state29 (x) → state28 (x) | 22% | 2193 |
state29 (x) → state36 (x) | 31% | 3017 |
state30 (H) → state48 (H) | 75% | 4577 |
state31 (x) → state0 (H) | 21% | 4564 |
state31 (x) → state10 (x) | 12% | 2588 |
state31 (x) → state31 (x) | 16% | 3555 |
state31 (x) → state32 (H) | 21% | 4551 |
state31 (x) → state39 (H) | 11% | 2408 |
state31 (x) → state50 (x) | 13% | 2822 |
state32 (H) → state17 (H) | 45% | 4062 |
state38 (x) → state4 (E) | 42% | 3304 |
state40 (H) → state41 (H) | 66% | 5482 |
state42 (H) → state48 (H) | 87% | 6105 |
state44 (E) → state27 (E) | 30% | 2996 |
state49 (H) → state22 (H) | 39% | 6674 |
state49 (H) → state24 (H) | 26% | 4508 |
state49 (H) → state30 (H) | 18% | 3162 |
state50 (x) → state10 (x) | 13% | 2807 |
state50 (x) → state31 (x) | 34% | 7362 |
state50 (x) → state50 (x) | 17% | 3772 |
state51 (x) → state15 (x) | 14% | 2056 |
state51 (x) → state31 (x) | 25% | 3597 |
state51 (x) → state50 (x) | 20% | 2986 |
state51 (x) → state51 (x) | 20% | 2892 |