Figure 6

TR Proteins from A. thaliana. A colored repeat distribution schematic generated by XSTREAM showing the 57 TR-containing proteins from A. thaliana (TAIR6_pep_20060907) with minP = 1 and minimum TR content = 0.7. These protein sequences are ordered by decreasing period from top to bottom. The longest period is shown in the top left panel and the shortest is shown in the bottom right panel. Notice two large classes of protein sequences (polyubiquitins and proline-rich extensin-like family proteins) as determined by grouping their TR domains with the consensus comparison module (see Appendix).