Figure 5
From: Discriminative motif discovery in DNA and protein sequences using the DEME algorithm
Discriminative motifs for thermophilic vs. mesophilic TATA-box proteins. Each column shows the aligned LOGOs from a single experiment. Column a shows the motif found by DEME using the thermophilic proteins as the positive set. Column b shows the DEME motif when the mesophilic proteins are used as the positive set. In each case, the upper LOGO illustrates the residue preferences in the motif sites reported by DEME in the thermophilic sequences.