Table 2 fREDUCEpredictions for regulators with poorly characterized specificities
From: fREDUCE: Detection of degenerate regulatory elements using correlation with expression
Regulator | Predicted Site | P-value | Motif from Literature Search |
|---|---|---|---|
ARG80 | TTYTCY | 34.3 | CYNYYAANKRMAR |
ARO80 | TRCCGM | 5.6 | TWRCCG |
ASK10 | AYTTKA | 9.1 | Â |
CST6 | TYAAWA | 7.0 | Â |
DAT1 | WTTSAA | 16.7 | Â |
ECM22 | GCRSCC | 16.2 | TCGTATA |
EDS1 | TWTTSA | 8.4 | Â |
FAP7 | WTRAAG | 11.3 | Â |
GAT3 | CCTSGGC | 15.2 | Â |
GCR2 | TTCAWW | 5.0 | CTTCC |
HAL9 | WTTRAA | 14.7 | Â |
HIR3 | WTTRAA | 22.0 | ACGCTAAA |
IME4 | YACACAC | 17.8 | Â |
MAL13 | CCASSG | 11.6 | Â |
MAL33 | GCRCAS | 13.8 | Â |
MET18 | WTTCAA | 8.2 | Â |
MGA1 | TTTRAY | 5.9 | Â |
MSN1 | MMCCCA | 3.8 | Â |
MTH1 | GGAGRA | 3.4 | CGGANNA * |
OAF1 | CGCASY | 4.9 | CGGNNNTNAN9–12CCG |
RGM1 | CSGSCC | 27.1 | Â |
RTG1 | ATYTRA | 10.3 | Â |
SIP3 | WTCAAW | 7.6 | Â |
SMK1 | WTGWAG | 3.9 | Â |
STB2 | CAAGGYC | 3.1 | Â |
STB6 | TATSAW | 5.6 | Â |
STP4 | AARMTT | 24.1 | Â |
TOS8 | RCACMC | 20.7 | Â |
UPC2 | MATSAA | 4.5 | Â |
WAR1 | TYAAGW | 6.6 | Â |
YBR239c | WATAYT | 16.8 | Â |
YDR049W | AWTGAW | 3.5 | Â |
YER051w | AKYACT | 3.9 | Â |
YER130C | CAARTW | 3.1 | Â |
YFL052w | WTCAAK | 3.6 | Â |
YGR067C | TTYAAW | 4.6 | Â |
YKR064W | WGTTRA | 6.3 | Â |
YLR278C | KTTMAA | 7.2 | Â |
YML081W | WCAAMT | 3.7 | Â |
YNR063W | TCAARTA | 2.4 | Â |
YPR196W | WTCAAW | 10.3 | Â |