Table 1 3D Data Browsers Used For Neuroanatomical Atlas Viewing

Viewer Developer Laboratory

Surgical Planning Laboratory, Brigham and Women's Hospital, Boston, MA, USA and The M.I.T. Computer Science and Artificial Intelligence Lab, M.I.T., Cambridge, MA, USA

Abbreviation

n.a.

Viewer URL

http://www.slicer.org

Software Reference

[29]

Exemplar Neuroimaging Project

Psychiatric NeuroImaging Lab, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA

Atlas URL

http://pnl.bwh.harvard.edu/projects/projects.html

Viewer Application Name

JAtlasViewer

Viewer Developer Laboratory

MRC Human Genetics Unit, Western General Hospital, Edinburgh, UK and The Institute of Human Genetics, University of Newcastle, Newcastle-upon-Tyne, UK

Abbreviation

n.a.

Viewer URL

http://genex.hgu.mrc.ac.uk/Software/JavaTools/JAtlasViewer/intro.html

Software Reference

[21]

Exemplar Neuroimaging Project

The Edinburgh Mouse Atlas Project (EMAP), Human Genetics Unit, MRC and The Section in Biomedical Sciences/Division of Biomedical and Clinical Sciences, The University of Edinburgh, Edinburgh, UK

Atlas URL

http://genex.hgu.mrc.ac.uk/intro.html

Viewer Application Name

The Mouse Brain Image Visualizer

Viewer Developer Laboratory

Center for Translational Neuroimaging and Computational Science Center, Brookhaven National Lab, Brookhaven, NY, USA

Abbreviation

MBIV

Viewer URL

http://vis7.bnl.gov/MouseAtlas/Visualization/main.html

Software Reference

[22]

Exemplar Neuroimaging Project

3D MRI Digital Atlas Database of Adult C57BL/6J Mouse Brain, Center for Translational Neuroimaging, Brookhaven National Lab, Brookhaven, NY, USA

Atlas URL

http://www.bnl.gov/CTN/mouse/

Viewer Application Name

NeuroTerrain Client-Server Atlas System

Viewer Developer Laboratory

Laboratory for Bioimaging and Anatomical Informatics, Dept. of Neurobiology and Anatomy, Drexel University College of Medicine, Philadelphia, PA, USA

Abbreviation

NetOStat/NT-SDK

Viewer URL

http://fireball.drexelmed.edu/neuroterrain/avail_tech/netostat.shtml

Software Reference

This report

Exemplar Neuroimaging Project

The Mouse Brain Library, Neurogenetics at University of Tennessee Health Science Center, Memphis, TN, USA

Atlas URL

http://www.mbl.org/

Viewer Application Name

The Pittsburgh Supercomputing Center Volume Browser

Viewer Developer Laboratory

Pittsburgh Supercomputing Center and the PSC Biomedical Initiative, The Pittsburgh Supercomputing Center, Carnegie Mellon University and the University of Pittsburgh, Pittsburgh, PA, USA

Abbreviation

PSC Volume Browser

Viewer URL

http://www.psc.edu/biomed/research/VB

Software Reference

[23]

Exemplar Neuroimaging Project

Variational Mouse Brain Atlas, Mouse Imaging Center, Toronto Centre for Phenogenomics, Mount Sinai Hospital, The Hospital for Sick Children, University Health Network and St. Michael's Hospital, Toronto, Ontario, CA

Atlas URL

http://www.mouseimaging.ca/research/var_brain_atlas.html

Viewer Application Name

Synchronized Histological Image Viewing Architecture

Viewer Developer Laboratory

The Laboratory of Neuro Imaging (LONI), Department of Neurology, UCLA, Los Angeles, CA, USA

Abbreviation

SHIVA

Viewer URL

http://www.loni.ucla.edu/Software/Software_Detail.jsp?software_id=12

Software Reference

[9]

Exemplar Neuroimaging Project

The Laboratory of NeuroImaging (LONI) Mouse Atlas Project (MAP), UCLA, Los Angeles, CA, USA

Atlas URL

http://www.loni.ucla.edu/MAP