Application of amino acid occurrence for discriminating different folding types of globular proteins

BMC Bioinformatics

Table 4 Performances with other features Mean performances [%] obtained with different features for the data set used in Ding and Dubchak [18]. Re-weighting scheme is employed

	Sensitivity	Precision	F1	Accuracy
	Features
secondary structure	35	32	40	36
polarity	19	18	26	21
polarizability	18	18	26	19
hydrophobicity	23	22	28	24
volume	21	20	25	22
	Composition
composition	34	33	34	35
composition + length	36	35	38	38
composition + other five features	35	39	39	39
	Occurrence
occurrence	40	40	39	42
occurrence + other five features	40	46	42	44

ISSN: 1471-2105