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Figure 2 | BMC Bioinformatics

Figure 2

From: Bioinformatic identification of novel putative photoreceptor specific cis-elements

Figure 2

3D histogram representing features of potential motifs after the iterative alignment. The vertical and horizontal axis plot the number of non-overlapping occurrences of a motif, and the motif length in nucleotides (nt), respectively. Color shows the number (on a log-10 scale) of motifs with the given parameters. The box shows the approximate area that is likely to contain functional motifs. The circle shows the region containing the motif sample in Fig. 3A. Longer motifs (> 20 bp) are longer simple or interspersed repeats.

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