Figure 3
From: Bioinformatic identification of novel putative photoreceptor specific cis-elements
Example of cone (A) and rod (B) enriched DNA motifs after statistical annotation. Columns from left to right give gene MGI Symbol, cell-specific expression patterns (C, cone; R, rod; background matches are removed for this figure), start position of motif occurrence relative to the transcription start site, strand relative to the transcription start site (+1), consensus sequence (shown on the top), and cross-species conservation score (see methods). Occurrences are sorted by distance from transcription start site. The cone motif (A) is similar to a known binding site (RXR). The rod motif (B) is similar to the c-Myb binding site. For both motifs, non-photoreceptor occurrences (n = 2, 9 for A and B, respectively) have been removed for simplicity.