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Table 1 Statistical/Functional data of determined modules.

From: Growing functional modules from a seed protein via integration of protein interaction and gene expression data

Functional Modules Protein Complexes in Functional Modules
Seed Protein Connectivity Density Members R MIPS Protein Complex p-Value
YGR210c 0.61 12 0.91 1. eIF2B*
2. eIF2*
3. Cytoplasmic translation init
<1e-14
5.4e-10
<1e-14
CDC39 (YCR093w) 0.73 20 0.75 1. NOT complex*
2. DNA polymerase alpha (I) – primase*
3. CCR4 complex
1.9e-13
7.5e-11
<1e-14
TAF5 (YBR198c) 0.79 30 0.83 1. TFIID*
2. TAFIIs*
3. SAGA*
4. ADA
<1e-14
<1e-14
<1e-14
<1e-14
RPB5 (YBR154c) 0.73 32 0.77 1. RNA polymerase III
2. RNA polymerase I
<1e-14
<1e-14
SRB6 (YBR253w) 0.77 26 0.89 1. RNA polymerase II holoenzyme
2. Kornberg's mediator (SRB)
3. Srb10p* complex
<1e-14
<1e-14
2.3e-10
PRE3 (YJL001w) 0.83 18 0.81 1. 20S proteasome*
2. 26S proteasome
<1e-14
<1e-14
SEC10 (YLR166c) 0.75 10 0.80 1. Exocyst complex <1e-14
RFC5 (YBR087w) 0.84 10 0.92 1. Replication factor C complex* <1e-14
ARC18 (YLR370c) 0.77 6 0.87 1. Arp2p/Arp3p complex <1e-14
SEC27 (YGL137w) 0.97 10 1.0 1. TRAPP <1e-14
  1. The sub-columns of 'Functional Modules' contain statistical data for various modules of different size, while in the two last sub-columns we display the MIPS description of the basic complexes of each module and their corresponding p-values. (*) DMSP manages to find the entire complex.