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Table 4 SAM Significance Results

From: Improving model construction of profile HMMs for remote homology detection through structural alignment

  3DCOFFEE MAMMOTH PROBCONS MAFFT TCOFFEE
CLUSTALW 10 -8 10 -8 10 -3 0.02 10 -4
TCOFFEE 10 -6 10 -6 0.23 0.08  
MAFFT 10 -6 10 -6 0.03   
PROBCONS 10 -5 10 -5    
MAMMOTH 0.28     
  1. Paired two-tailed results when comparing performance of SAM alignments for all the multiple alignment tools.