From: Improving model construction of profile HMMs for remote homology detection through structural alignment
HMMER-CLUSTALW × SAM-CLUSTALW
0.01
HMMER-TCOFFEE × SAM-TCOFFEE
10 -4
HMMER-MAFFT × SAM-MAFFT
10 -6
HMMER-PROBCONS × SAM-PROBCONS
HMMER-3DCOFFEE × SAM-3DCOFFEE
10 -5
HMMER-MAMMOTH × SAM-MAMMOTH