Table 2 PWMs significantly associated with gene expression changes in SMC, SQ, and COID in comparison with normal lung tissues.

Motif Name

AC

p-value

q-value

AC

p-value

q-value

AC

p-value

q-value

V$CETS1P54_01

9.7

0

0

17.8

0

0

11.1

0

0

V$CETS1P54_03

8.5

0

0

15.2

0

0

9.8

0

0

V$E2F_02

9.2

0

0

6.7

0.0022

0.015

5.0

0.033

0.076

V$E2F_Q2

11.0

0

0

9.4

0

0

7.3

0.0031

0.018

V$E2F_Q4

13.6

0

0

9.2

0

0

5.5

0.0073

0.031

V$E2F1_Q3

18.1

0

0

21.1

0

0

12.0

0

0

V$E2F1_Q6

14.9

0

0

13.9

0

0

7.5

0.0008

0.0066

V$E2F1_Q6_01

13.5

0

0

12.5

0

0

6.2

0.0095

0.037

V$E2F1DP1_01

11.1

0

0

10.9

0

0

6.6

0

0

V$E2F1DP1RB_01

10.3

0

0

7.5

0.0013

0.010

5.2

0.031

0.074

V$E2F1DP2_01

10.0

0

0

9.4

0

0

7.0

0.0013

0.0096

V$E2F4DP2_01

9.4

0

0

9.7

0

0

6.2

0.0055

0.025

V$ELF1_Q6

-6.7

0.0052

0.041

-7.9

0

0

-9.3

0

0

V$ELK1_02

6.7

0.0063

0.047

16.1

0

0

9.6

0

0

V$ETF_Q6

6.6

0.013

0.070

5.2

0.017

0.066

7.6

0

0

V$HNF3_Q6

-5.4

0.015

0.079

-5.9

0.031

0.096

-7.8

0

0

V$HNF3_Q6_01

-5.9

0.0094

0.060

-6.4

0.014

0.059

-8.5

0.0001

0.0010

V$IRF1_Q6

-6.4

0.019

0.089

-5.7

0.019

0.070

-9.0

0

0

V$NFKAPPAB65_01

-6.1

0.0067

0.048

-6.0

0.020

0.072

-8.2

0

0

V$NRF1_Q6

7.7

0

0

8.4

0

0

7.4

0.0012

0.0092

V$P53_02

-5.4

0.022

0.099

-6.3

0

0

-4.9

0.041

0.089

V$PAX3_B

6.0

0.018

0.086

7.6

0

0

5.9

0.0094

0.037

V$PEA3_Q6

-7.3

0.0001

0.0010

-6.2

0.0008

0.0077

-13.0

0

0

V$SREBP1_Q6

-7.4

0

0

-12.0

0

0

-8.3

0.0022

0.014

V$STAF_02

8.4

0

0

8.1

0.0013

0.010

8.3

0

0

V$ZF5_01

10.5

0

0

7.3

0.0050

0.028

7.4

0

0

V$ZF5_B

8.4

0

0

6.3

0.0040

0.023

5.8

0.019

0.058