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Table 5 Average MCC distributions of tmRNA and RNaseP secondary structure predictions done with the RNAalifold algorithm and using the model M HC and the model M G C + G U MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGacaGaaiaabeqaaeqabiWaaaGcbaWenfgDOvwBHrxAJfwnHbqeg0uy0HwzTfgDPnwy1aaceaGae83mH00aaSbaaSqaaiab=zq8hjab=jq8djabgUcaRiab=zq8hjab=rr8vbqabaaaaa@3EE4@ of SSCA for selecting homologous sequences.

From: Predicting RNA secondary structure by the comparative approach: how to select the homologous sequences

 

All sequences

M HC

M G C + G U MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGacaGaaiaabeqaaeqabiWaaaGcbaWenfgDOvwBHrxAJfwnHbqeg0uy0HwzTfgDPnwy1aaceaGae83mH00aaSbaaSqaaiab=zq8hjab=jq8djabgUcaRiab=zq8hjab=rr8vbqabaaaaa@3EE4@

tmRNA

52,54

58,17

60,09

RNaseP

58,92

60,93

65,37

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BMC Bioinformatics

ISSN: 1471-2105

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