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Table 1 Examples of SAT results

From: SAT, a flexible and optimized Web application for SSR marker development

Origin of sequences

Species

Number of sequences analyzed

Number of sequences with SSRs

Consensus

Singletons and singlets

Sequences with specific primer pairs

Sequences with non specific primer pairs

Sequences without primers

SSR enriched banks

Sorghum

2747

1176

379

144

346 (66.16%)

63 (12.04%)

114 (21.80%)

 

Coffee

1149

948

246

251

295 (59.36%)

45 (9.05%)

157 (31.59%)

 

Guava

464

440

57

272

190 (57.75%)

6 (1.82%)

133 (40.43%)

 

Yam

209

172

14

121

54 (40.00%)

12 (8.89%)

69 (51.11%)

 

Locust

182

171

8

143

54 (35.76%)

16 (10.60%)

81 (53.64%)

 

Amblyomma variegatum

86

79

8

38

10 (21.74%)

15 (32.61%)

21 (45.65%)

EST banks

Coffee

2529

228

3

219

176 (79.28%)

13 (5.86%)

33 (14.86%)

 

Citrus

1842

350

36

270

213 (69.61%)

44 (14.38%)

49 (16.01%)