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Table 10 Predictive accuracies of our method for datasets of Table 9

From: Subcellular location prediction of proteins using support vector machines with alignment of block sequences utilizing amino acid composition

Predictor

Location

Sensitivity

Specificity

MCC

Average MCC

Overall Accuracy

Our method (25%)

cTP

0.7684

0.6577

0.6434

0.7068

0.7829

 

mTP

0.7900

0.8404

0.7111

  
 

SP

0.7311

0.9158

0.7751

  
 

other

0.8320

0.7172

0.6976

  

Our method (70%)

cTP

0.6638

0.8750

0.7289

0.7937

0.8625

 

mTP

0.9618

0.8118

0.8006

  
 

SP

0.9095

0.9505

0.9020

  
 

other

0.7246

0.8475

0.7431

  
  1. Note: Parameters of Table 2 are used for all methods.
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BMC Bioinformatics

ISSN: 1471-2105

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