Table 6 Prediction results in the pocket similarity network by using different cRMSD p-values as thresholds. The detailed prediction results of thresholds from 10-3 to 10-5 are listed in the Additional Files.
From: Predicting gene ontology functions from protein's regional surface structures
Threshold | 10-2 | 10-3 | 10-4 | 10-5 |
|---|---|---|---|---|
Maximum F-measure | 0.756 | 0.875 | 0.898 | 0.904 |
Recall-precision | (0.774,0.706) | (0.888,0.839) | (0.907,0.869) | (0.913,0.877) |
Coverage | 84.50% | 96.98% | 98.35% | 99.16% |
Number of proteins | 316 | 265 | 242 | 237 |