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Figure 1 | BMC Bioinformatics

Figure 1

From: Penalized likelihood for sparse contingency tables with an application to full-length cDNA libraries

Figure 1

Graphical display of interaction vector. The upper panel shows the estimated splicing interaction vectors β _ MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGacaGaaiaabeqaaeqabiWaaaGcbaWaaecaaeaaiiWacqWFYoGyaiaawkWaaaaa@2E3E@ of rat cerebellum tissues at postnatal days six, 12 and 22. The lower panel shows the splicing interaction vector β _ MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGacaGaaiaabeqaaeqabiWaaaGcbaWaaecaaeaaiiWacqWFYoGyaiaawkWaaaaa@2E3E@ of rat cerebellum tissues at the age of 90 days, which is considered adult, as well as the splicing interaction vector β _ MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGacaGaaiaabeqaaeqabiWaaaGcbaWaaecaaeaaiiWacqWFYoGyaiaawkWaaaaa@2E3E@ of rat cerebral tissue at the age of 90 days. Within an interaction degree, the sequence of coefficients is ordered from left to right as follows: e.g. for 2nd order interactions, 123, 124, 125,..., 345, where 1,...., 5 represent exons 12, 23B, 40, 41, and 42 in the rip3r1 gene, as described in [18].

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