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Figure 4 | BMC Bioinformatics

Figure 4

From: Effective transcription factor binding site prediction using a combination of optimization, a genetic algorithm and discriminant analysis to capture distant interactions

Figure 4

Significant correlations between frequencies of locally positioned dinucleotides (LPDs) for SF-1 BSs. Each horizontal strip depicts one correlation between two LPDs. a) Positive correlations, 0.001 < p < 0.01; b) negative correlations, 0.001 < p < 0.01; c) positive correlations, p < 0.001; d) negative correlations, p < 0.001. Whole analyzed 30 bp long region corresponds to [1;30] window of 29 dinucleotide positions. Also note that the SF-1 consensus sequence GTCAAGGTCA [39] located within region [10;19].

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BMC Bioinformatics

ISSN: 1471-2105

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