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Figure 6 | BMC Bioinformatics

Figure 6

From: Effective transcription factor binding site prediction using a combination of optimization, a genetic algorithm and discriminant analysis to capture distant interactions

Figure 6

Analysis of TFBSs predictions in EPD promoters by SiteGA, PWMs and combined PWM & SiteGA approach. X-axis – TF types and stringencies in terms of fixed TP rates (50, 60 and 70% for SiteGA and PWMs); Y-axis – no. of predicted sites (data labels are marked for each point). Combined approach implied that both PWM and SiteGA models recognized a potential site.

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BMC Bioinformatics

ISSN: 1471-2105

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