Table 2 List of proteins found. List of proteins found with Sequest and X!Tandem from the PARP-1 immunoprecipitation assay and validated with Scaffold software. Biological sample name refers to the experiment number assigned by the PARPs-DB. This table summarizes the identification from 5 independent immunoprecipitation experiments.
Biological sample name | International Protein Index | SwissProt/Uniprot accession no. | Protein identification | Protein identification probability | Gene name |
|---|---|---|---|---|---|
IP111 | IPI00375358 | P35251 | Splice Isoform 1 of Activator 1 140 kDa subunit | 99.8% | RFC1 |
IP111 | IPI00017412 | P35250 | Splice Isoform 1 of Activator 1 40 kDa subunit | 92.9% | RFC2 |
IP577 | IPI00017412 | P35250 | Splice Isoform 1 of Activator 1 40 kDa subunit | 100.0% | RFC2 |
IP597 | IPI00017412 | P35250 | Splice Isoform 1 of Activator 1 40 kDa subunit | 100.0% | RFC3 |
IP230 | IPI00031521 | P40938 | Similar to human replication factor C (activator 1) 3, 38 kDa | 87.7% | RFC3 |
IP372 | IPI00031521 | P40938 | Similar to human replication factor C (activator 1) 3, 38 kDa | 99.8% | RFC3 |
IP577 | IPI00031521 | P40938 | Similar to human replication factor C (activator 1) 3, 38 kDa | 100.0% | RFC3 |
IP597 | IPI00031521 | P40938 | Similar to human replication factor C (activator 1) 3, 38 kDa | 100.0% | RFC3 |
IP111 | IPI00017381 | P35249 | Activator 1 37 kDa subunit | 92.9% | RFC4 |
IP577 | IPI00017381 | P35249 | Activator 1 37 kDa subunit | 100.0% | RFC4 |
IP597 | IPI00017381 | P35249 | Activator 1 37 kDa subunit | 100.0% | RFC4 |
IP577 | IPI00031514 | P40937 | Activator 1 36 kDa subunit | 100.0% | RFC5 |
IP597 | IPI00031514 | P40937 | Activator 1 36 kDa subunit | 100.0% | RFC5 |
IP111 | IPI00449049 | P09874 | Poly [ADP-ribose] polymerase 1 | 100.0% | PAPR-1 |
IP230 | IPI00449049 | P09874 | Poly [ADP-ribose] polymerase 1 | 100.0% | PARP-1 |
IP372 | IPI00449049 | P09874 | Poly [ADP-ribose] polymerase 1 | 100.0% | PARP-1 |
IP577 | IPI00449049 | P09874 | Poly [ADP-ribose] polymerase 1 | 100.0% | PARP-1 |
IP597 | IPI00449049 | P09874 | Poly [ADP-ribose] polymerase 1 | 100.0% | PAPR-1 |