Effective selection of informative SNPs and classification on the HapMap genotype data

BMC Bioinformatics

Table 4 Top ranked features whose appearance frequencies are greater than 83.33% (25/30) in 30 simulations, and their mean ranking values by the F-statistics ranking measure for 3 populations

Ranking No. on Mean Ranking Values	Name of SNPs	Chromosome	Mean ranking values in 30 simulations	Ranking No. on Appearance Frequency
1	rs232045	chr11	0.9573	7
2	rs12786973	chr11	0.9547	6
3	rs7946015	chr11	0.9544	2
4	rs4756778	chr11	0.9524	3
5	rs7931276	chr11	0.9521	9
6	rs4823557	chr11	0.9518	5
7	rs10832001	chr11	0.9506	4
8	rs35397	chr5	0.9491	8
9	rs11604470	chr11	0.9480	12
10	rs10831841	chr11	0.9478	11
11	rs2296224	chr1	0.9456	10
12	rs12286898	chr11	0.9387	13
13	rs1869084	chr11	0.9341	20
14	rs4491181	chr11	0.9307	26
15	rs1604797	chr11	0.9258	1
16	rs7931276	chr11	0.9161	14
17	rs11826168	chr11	0.9103	19
18	rs477036	chr11	0.9072	16
19	rs7940199	chr11	0.9032	22
20	rs4429025	chr11	0.8711	25
21	rs6483747	chr11	0.8435	17
22	rs199138	chr15	0.8417	18

ISSN: 1471-2105