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Table 1 Relative occurrence frequencies of the BSs in the promoter regions of genes grouped according to functional activity

From: Recognition of interferon-inducible sites, promoters, and enhancers

  Relative occurrence frequency of a site in a sample   
BS (position with respect to the TSS) training-ISG set training-ISG set excl.* control-Gluco set control-LipM set control-EPD set ISGs/EPD ratio
IRF1 (-200 to -1) 0.77 0.70 0.21 0.18 0.21 3.67
ISGF3 (-100 to -1) 0.28 0.19 0.00 0.00 0.05 5.60
ISGF3 (-200 to -1) 1.00 0.85 0.08 0.17 0.10 10.00
STAT1 (-200 to +1) 0.19 0.15 0.05 0.00 0.08 2.38
NF-κB (-100 to +100) 0.93 0.80 0.46 0.46 0.12 2.02
  1. *BSs used for drawing training samples for site recognition were omitted