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Table 2 The 41 source organisms used to find orthologous proteins

From: Phylogenetic tree information aids supervised learning for predicting protein-protein interaction based on distance matrices

Escherichia coli K-12 MG1655

Salmonella typhi CT1 8

Samonella enerica

Samonella typhimurium LT2

Yersinia pestis CO92

Yersinia pseudotuberculosis

Shigella flexneri 301 (serotype 2a)

Photorhabdus luminescens

Pasteurella multocida

Mannheimia succiniciproducens

Vibrio cholerae

Vibrio vulnificus YJ016

Vibrio parahaemolyticus

Photobacterium profundum

Pseudomonas aeruginosa

Pseudomonas putida

Pseudomonas syringae pv. Tomato

Acinetobacter sp. ADP1

Shewanella oneidensis

Neisseria meningitides MC58 (serogroup B)

Chromobacterium violaceum

Ralstonia solanacearum

Bordetella pertussis

Bordetella parapertussis

Nitrosomonas europaea

Campylobacter jejuni NCTC11168

Rhodopseudomonas palustris

Bacillus subtilis

Bacillus halodurans

Bacillus anthracis Ames

Bacillus cereus ATCC 14579

Bacillus thuringiensis

Bacillus lucheniformis ATCC 14580

Oceanobacillus iheyensis

Staphylococcus aureus N315 (MRSA)

Staphylococcus epidermidis ATCC12228

Corynebacterium efficiens

Streptomyces avermitilis

Propionibacterium acnes

Rhodopirellula baltica (Pirellula sp.)

Anabaena sp. PCC7120 (Nostoc sp. PCC7120)