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Table 3 The order propensity (OP) value (GlobPlot)

From: False occurrences of functional motifs in protein sequences highlight evolutionary constraints

Pattern region

dataset

N

OP average

Q25

Q75

I

sprot100

63

0.37 ± 0.03

0.18

0.50

III

 

31

0.25 ± 0.03

0.14

0.33

II*

 

252

0.31 ± 0.02

0.13

0.43

I

human100

191

0.25 ± 0.06

0.03

0.30

III

 

2

0.14 ± 0.02

0.14

0.16

II*

 

1161

0.22 ± 0.02

0.00

0.30

I

yeast100

10

0.41 ± 0.08

0.23

0.49

III

 

0

-

-

-

II*

 

531

0.32 ± 0.04

0.17

0.39

  1. N is the number of patterns. The number of patterns in region III and region II* differs from the number of patterns in the corresponding regions of table 2 because only for patterns with FP > 0 the OP value can be calculated.
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BMC Bioinformatics

ISSN: 1471-2105

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