Table 8 5 examples of circular permutations detected with low structural similarity
From: Comparison of protein structures by growing neighborhood alignments
SCOPid1 (size) | SCOPid2 (size) | seq nbhd LAli/RMSD | DALI LAli/RMSD |
|---|---|---|---|
d1t6gc_(182) | d1okqa2(185) | 92/2.77 | -/- |
d1olra_(226) | d1w0pa2(197) | 107/2.72 | 101/3.8 |
d1dypa_(266) | d1nls__(238) | 129/2.39 | 83/3.0 |
d1s2ba_(199) | d1epwa1(218) | 107/2.87 | 117/3.9 |
d1wd3a1(319) | d1mvea_(238) | 143/2.75 | 133/3.7 |