Figure 3

Number of true discovered genes versus pe FDR for the two-study simulation data. The maximum number of true discovered genes versus posterior expected false discovery rate (pe FDR) for the standardized expression integration model (blue circles), probability integration model (black diamonds), individual analyses of Study 1 (red checks) and Study 2 (green triangles), for the two-study simulation data with high mean ${\tau }_g^2$ = 0.7 (differentially expressed); 0.07 (non-differentially expressed) and the following simulated percent differentially expressed genes p _s : a) 5%; b) 10%; c) 25%.