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Table 5 Sensitivity analysis results for the Bacillus subtilis biological data. Sensitivity analysis results for the prior degrees of freedom assigned to the slide and experiment effect variance parameters, φ j g 2 MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaqabeGadaaakeaaiiGacqWFgpGzdaqhaaWcbaGaemOAaOMaem4zaCgabaGaeGOmaidaaaaa@323F@ and σ j g 2 MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaqabeGadaaakeaaiiGacqWFdpWCdaqhaaWcbaGaemOAaOMaem4zaCgabaGaeGOmaidaaaaa@3249@ , respectively, for the B. subtilis mutant and induction biological study data. Shown are the integration-driven discovery rate (IDR), integration-driven revision rate (IRR) and posterior expected false discovery rate (pe FDR) for threshold value of posterior probability of differential expression γ = 0.95, for the standardized expression integration (SEI) and probability integration (PI) models applied to the B. subtilis mutant and induction biological study data.

From: Bayesian meta-analysis models for microarray data: a comparative study

Prior Degrees of Freedom Integration-Driven Discovery Rate, γ= 0.95 Integration-Driven Revision Rate, γ= 0.95 Posterior Expected FDR, γ= 0.95
φ j g 2 MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaqabeGadaaakeaaiiGacqWFgpGzdaqhaaWcbaGaemOAaOMaem4zaCgabaGaeGOmaidaaaaa@323F@ σ j g 2 MathType@MTEF@5@5@+=feaafiart1ev1aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacH8akY=wiFfYdH8Gipec8Eeeu0xXdbba9frFj0=OqFfea0dXdd9vqai=hGuQ8kuc9pgc9s8qqaq=dirpe0xb9q8qiLsFr0=vr0=vr0dc8meaabaqaciaacaGaaeqabaqabeGadaaakeaaiiGacqWFdpWCdaqhaaWcbaGaemOAaOMaem4zaCgabaGaeGOmaidaaaaa@3249@ SEI PI SEI PI SEI PI
3 3 35.7% 37.9% 20.3% 8.9% 0.013 0.0073
6 6 13.9% 20.1% 7.9% 5.3% 0.0088 0.0049
10 10 7.1% 14.0% 7.1% 2.4% 0.0059 0.0037
20 20 6.3% 14.5% 7.7% 0.0% 0.0044 0.0040
40 40 5.3% 13.3% 10.1% 0.7% 0.0038 0.0041