Towards a comprehensive structural coverage of completed genomes: a structural genomics viewpoint

BMC Bioinformatics

Table 4 Analysis of the kingdom distribution.

	Kingdom distribution of structurally uncharacterised families
	2500 largest Pfam-A	All Pfam-A	All Pfam-A & Newfam
Eukaryotic	788	1286	8240
Viral	295	503	1145
Prokaryotic (5 or more)	1381	1959	6290
Prokaryotic (1 or more)	1377	2114	8304
No prokaryotic members	1125	1833	9488

Analysis of the kingdom distribution of: Column 2, the largest 2500 structurally uncharacterised Pfam-A families Column 3, All structurally uncharacterised Pfam-A families Column 4, All structurally uncharacterised Pfam-A and Newfam families Of the remaining structurally uncharacterised Pfam-A families, 1959 have 5 or more prokaryotic sequences – additional Newfam families can be used to build a larger target list (eg 2500 families shown in Figure 6, black bars).

ISSN: 1471-2105