Environment specific substitution tables for thermophilic proteins

BMC Bioinformatics

Table 1 G/C content and Optimal Growth Temperature of the organisms analysed in this paper.

ARCHAEA	% G-C	OGT (°C)
Aeropyrum pernix K1	56	90–95
Methanocaldococcus jannaschii DSM 2661	31	85
Methanothermobacter thermautotrophicus str. Delta_H	49	65–70
Archaeoglobus fulgidus DSM 4304	48	83
Thermoplasma acidophilum DSM 1728	45	59
Thermoplasma volcanium GSS1	39	60
Sulfolobus solfataricus P2	35	85
Pyrococcus furiosus DSM 3638	40	100
Methanopyrus kandleri AV19	61	98
Picrophilus torridus DSM 9790	35	60
EUBACTERIA	% G-C	OGT (°C)
Thermotoga maritima MSB8	46	80
Aquifex aeolicus VF5 96	43	96
Thermoanaerobacter tengcongensis MB4	37	75
Thermosynechococcus elongatus BP-1	53	55
Thermus thermophilus HB27	69	68
Geobacillus kaustophilus HTA426	52	55
Thermobifida fusca YX	67	50–55

Data were obtained from NCBI genome database [32] with the exception of G/C content and OGT of Geobacillus kaustophilus, which were taken from the DSMZ database of organisms (Braunschweg, Germany) [37].

ISSN: 1471-2105