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Table 1 c-HSP status definition.

From: Gene models from ESTs (GeneModelEST): an application on the Solanum lycopersicum genome

cHSP status

exact match

 

partial match

 

internal match

 

undefined edges

 

e-HSP overlapping introns

     

Unchained e-HSP

 

Chained e-HSP

    

Confirmed

X

OR

X

OR

X

AND

0

AND

0

AND

0

Undefined

X

OR

X

OR

X

AND

0

AND

X

AND

0

Ambiguous

X

OR

X

OR

X

AND

X

OR

X

AND

X

  1. The definition of the status of a c-HSP is the result of all the pairwise comparisons versus e-HSP aligned in the genomic region. X indicates at least one occurrence of the corresponding instance. To define the c-HSP status Boolean operators have been used.