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Table 3 Average error for reconstructing masked genotypes on Hudson.

From: Constrained hidden Markov models for population-based haplotyping

Method 10% 20% 30% 40%
fastPHASE 0.035 0.041 0.051 0.063
SpaMM 0.017 0.023 0.034 0.052
fastPHASE-NA 0.056 0.062 0.074 0.087
HIT 0.081 0.093 0.108 0.127
GERBIL 0.102 0.122 0.148 0.169
  1. From 10% to 40% of all genotypes were masked randomly. Results are averaged over 50 datasets.