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Figure 2 | BMC Bioinformatics

Figure 2

From: Gene function prediction based on genomic context clustering and discriminative learning: an application to bacteriophages

Figure 2

An illustration of a cluster containing four genomes. Performing function prediction over gene class "A" consists of two steps: i) perform Leave-One-Out cross validation over the first three genomes and hence adapt to the optimal kernel parameters, ii) find A in the bottom genome within the confidence interval. Since the distances between A and B genes are the most conserved, class B will act as the reference genes for computing relative positions for class A genes for use as one of the training features.

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