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Table 2 L/10 best scores accuracy improvements of GARP contact prediction for P2PconPred on the test set using parameters: 5% top scores a, W = 2, Geometric unweighted mutual coefficient.

From: Refining intra-protein contact prediction by graph analysis

  Without GARP procedure With GARP procedure
  Accuracy protein Accuracy core Accuracy protein Accuracy core
P2PConPred 0.12 ± 0.018 0.24 ± 0.027 0.18 ± 0.024 0.26 ± 0.030
PoCM 0.23 ± 0.027 0.16 ± 0.021 - -
  1. a In cases where less then L/10 predictions where reported by GARP, the calculation was repeated starting with the top 10% of scores. This was necessary for no more then five families in predicting contacts within the core.