Table 3 Consensus topology for the Msa protein including the N-terminal signal peptide prediction
From: Structure and function predictions of the Msa protein in Staphylococcus aureus
| Â | N-terminal | TMS 1 | TMS 2 | TMS 3 |
|---|---|---|---|---|
TopPred | IN | 27–47 | - | 106–126 |
TMHMM | IN | 25–47 | 54–76 | 108–125 |
TMpred | IN | 29–47 | 55–75 | 107–123 |
SPLIT | IN | 27–47 | 54–69 | 107–126 |
HMMTOP | IN | 28–47 | 60–77 | 108–125 |
MEMSAT | IN | 30–47 | 54–70 | 108–125 |
PHDhtm | OUT | 14–34 | 55–72 | 108–125 |
TSEG | No Prediction | 24–47 | 54–75 | 105–128 |
DAS | No Prediction | 27–44 | 54–67* | 110–124 |
Consensus | IN | 27–47 | 54–75 | 108–125 |