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Table 1 Top predictable GO biological processes identified using SVM and tenfold validation with the data of individual tissues or the combined data

From: Term-tissue specific models for prediction of gene ontology biological processes using transcriptional profiles of aging in drosophila melanogaster

Term Name Modela TN FP FN TP Adj.Pc
GO:0006118 electron transport CM 1128 100 56 26 1.35-E06
GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome CM 1263 41 0 6 1.66-E06
GO:0006120 mitochondrial electron transport, NADH to ubiquinone CM 1227 59 6 18 1.12-E11
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen CM 1259 42 5 4 6.78-E03
GO:0006629 lipid metabolic process Brain 1004 245 41 20 2.01-E01
GO:0006637 acyl-CoA metabolic process Gut 1044 259 2 5 1.05-E01
GO:0006858 extracellular transport Fat 1105 169 21 15 2.43-E03
GO:0008643 carbohydrate transport Fat 1167 126 9 8 5.33-E03
GO:0006869 lipid transport Gut 1051 241 7 11 5.07-E03
GO:0005975 carbohydrate metabolic process Fat 1140 115 38 17 6.40-E04
GO:0006099 tricarboxylic acid cycle Testis 1218 75 7 10 6.34-E04
GO:0006511 ubiquitin -deoendent protein catabolic process Testis 1075 219 7 9 1.69-E02
GO:0016579 protein deubiquitination Testis 1043 258 2 7 1.36-E02
GO:0006030 chitin metabolic process CM 1187 108 6 9 1.22-E04
GO:0051189 prosthetic group metabolic process MT 1136 157 10 7 6.73-E02
GO:0007067 mitosis MT 1082 213 8 7 1.31-E01
GO:0006350 transcription Fat 1203 94 9 4 2.01-E02
GO:0007031 peroxisome organization and biogenesis Gut 1146 156 3 5 2.53-E02
GO:0006625 protein targeting to perosisome Gut 1129 174 2 5 2.42-E02
GO:0007498 Mesoderm development MT 1077 223 5 5 2.03-E01
GO:0015986 ATP synthesis coupled proton transport DTM 1224 73 9 4 1.11-E01
  1. a The tissues (or organs) generating the data used for model training and validation where MT and DTM represent malpighian tubule, and dorsal thoracic muscle, respectively, and CM represents combined data. b SN and SP represent sensitivity and specificity, respectively. c FDR-adjusted p-value.
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